Aire software
CEMAC maintain a collection of software applications on the Aire system, which can be accessed via the module command.
The build scripts and related files for this software can be found on GitHub:
The content is located on Aire within the directory /users/cemac.
Usage
The cemac.sh and cemac.csh files can be used to set up the environment for
a bash or csh shell.
AIRE defaults to bash shell, and the following could be added to your
${HOME}/.bashrc file:
if [ -r /users/cemac/cemac.sh ] ; then
. /users/cemac/cemac.sh
fi
The environment files will do the following:
Variables
The following variables will be set:
CEMAC_DIR: will be set to the location of the CEMAC directory,/users/cemacCEMAC_SOFTWARE: will be set to the location of the CEMAC software directory,/users/cemac/software
Environment Modules
All modules will be unloaded (module purge), and the MODULEPATH variable will be unset,
so any centrally provided modules will not be visible.
The modulefiles within the ${CEMAC_SOFTWARE}/modulefiles directory will be added to the
MODULEPATH.
Available software can be viewed by running:
module avail
Note that some applications are not visible until a dependency has been load.
For example, if you first load the Intel compilers:
module load intel
The module avail command should then show additional software which has been compiled with the Intel compilers.
It is possible to load dependent software in a single command, if the dependency is included. This command will load the Intel compilers, and appropriate versions of OpenMPI and NetCDF:
module load intel openmpi netcdf